[HTML][HTML] The inflammatory bowel disease transcriptome and metatranscriptome meta-analysis (IBD TaMMA) framework
Nature Computational Science, 2021•nature.com
Inflammatory bowel disease (IBD) is a class of chronic disorders whose etiogenesis is still
unknown. Despite the high number of IBD-related omics studies, the RNA-sequencing data
produced results that are hard to compare because of the experimental variability and
different data analysis approaches. We here introduce the IBD Transcriptome and
Metatranscriptome Meta-Analysis (TaMMA) framework, a comprehensive survey of publicly
available IBD RNA-sequencing datasets. IBD TaMMA is an open-source platform where …
unknown. Despite the high number of IBD-related omics studies, the RNA-sequencing data
produced results that are hard to compare because of the experimental variability and
different data analysis approaches. We here introduce the IBD Transcriptome and
Metatranscriptome Meta-Analysis (TaMMA) framework, a comprehensive survey of publicly
available IBD RNA-sequencing datasets. IBD TaMMA is an open-source platform where …
Abstract
Inflammatory bowel disease (IBD) is a class of chronic disorders whose etiogenesis is still unknown. Despite the high number of IBD-related omics studies, the RNA-sequencing data produced results that are hard to compare because of the experimental variability and different data analysis approaches. We here introduce the IBD Transcriptome and Metatranscriptome Meta-Analysis (TaMMA) framework, a comprehensive survey of publicly available IBD RNA-sequencing datasets. IBD TaMMA is an open-source platform where scientists can explore simultaneously the freely available IBD-associated transcriptomics and microbial profiles thanks to its interactive interface, resulting in a useful tool to the IBD community.
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